The problem is this VPS seems to be an OpenVZ template from HyperVM. The only way to make it work was to disable i386 packages since this was an x64 kernel. That shouldn't be necessary but it was the only way to make yum stop quitting after the first package or two. I couldn't find any issue by checking the logs either.
echo y|yum install vim-minimal telnet expect jwhois net-tools slocate iptables elinks gawk
Loading "fastestmirror" plugin
Loading mirror speeds from cached hostfile
* rpmforge: ftp-stud.fht-esslingen.de
* extras: ftp.estpak.ee
* updates: ftp.estpak.ee
* base: ftp.estpak.ee
* addons: ftp.estpak.ee
Setting up Install Process
Parsing package install arguments
Package vim-minimal - 2:7.0.109-6.el5.x86_64 is already installed.
Package gawk - 3.1.5-14.el5.x86_64 is already installed.
Resolving Dependencies
--> Running transaction check
---> Package iptables.x86_64 0:1.3.5-5.3.el5_4.1 set to be updated
---> Package elinks.x86_64 0:0.11.1-6.el5_4.1 set to be updated
---> Package net-tools.x86_64 0:1.60-81.el5 set to be updated
---> Package telnet.x86_64 1:0.17-39.el5 set to be updated
---> Package mlocate.x86_64 0:0.15-1.el5.2 set to be updated
---> Package expect.i386 0:5.43.0-5.1 set to be updated
--> Processing Dependency: libtcl8.4.so for package: expect
---> Package jwhois.x86_64 0:3.2.3-8.el5 set to be updated
---> Package expect.x86_64 0:5.43.0-5.1 set to be updated
--> Running transaction check
---> Package tcl.i386 0:8.4.13-4.el5 set to be updated
--> Finished Dependency Resolution
Dependencies Resolved
=============================================================================
Package Arch Version Repository Size
=============================================================================
Installing:
elinks x86_64 0.11.1-6.el5_4.1 base 1.0 M
expect i386 5.43.0-5.1 base 158 k
expect x86_64 5.43.0-5.1 base 160 k
iptables x86_64 1.3.5-5.3.el5_4.1 base 242 k
jwhois x86_64 3.2.3-8.el5 base 95 k
mlocate x86_64 0.15-1.el5.2 base 48 k
telnet x86_64 1:0.17-39.el5 base 59 k
Updating:
net-tools x86_64 1.60-81.el5 base 367 k
Installing for dependencies:
tcl i386 8.4.13-4.el5 base 956 k
Transaction Summary
=============================================================================
Install 8 Package(s)
Update 1 Package(s)
Remove 0 Package(s)
Total download size: 3.1 M
Is this ok [y/N]: Downloading Packages:
Running rpm_check_debug
Running Transaction Test
Finished Transaction Test
Transaction Test Succeeded
Running Transaction
Installing: expect ####################### [ 1/10]
Installing: jwhois ####################### [ 2/10]
yum install centos-release.x86_64
Loading "fastestmirror" plugin
Loading mirror speeds from cached hostfile
* base: ftp.estpak.ee
* updates: ftp.estpak.ee
* addons: ftp.estpak.ee
* extras: ftp.estpak.ee
Setting up Install Process
Parsing package install arguments
Resolving Dependencies
--> Running transaction check
---> Package centos-release.x86_64 10:5-5.el5.centos set to be updated
--> Finished Dependency Resolution
Dependencies Resolved
=============================================================================
Package Arch Version Repository Size
=============================================================================
Updating:
centos-release x86_64 10:5-5.el5.centos base 19 k
Transaction Summary
=============================================================================
Install 0 Package(s)
Update 1 Package(s)
Remove 0 Package(s)
Total download size: 19 k
Is this ok [y/N]: y
Downloading Packages:
(1/1): centos-release-5-5 100% |=========================| 19 kB 00:00
Running rpm_check_debug
Running Transaction Test
Finished Transaction Test
Transaction Test Succeeded
Running Transaction
Updating : centos-release ######################### [1/2]
Cleanup : centos-release ######################### [2/2]
Updated: centos-release.x86_64 10:5-5.el5.centos
Complete!
#yum update
Loading "fastestmirror" plugin
Loading mirror speeds from cached hostfile
* base: ftp.estpak.ee
* updates: ftp.estpak.ee
* addons: ftp.estpak.ee
* extras: ftp.estpak.ee
Setting up Update Process
Resolving Dependencies
--> Running transaction check
---> Package rpm-python.x86_64 0:4.4.2.3-20.el5_5.1 set to be updated
---> Package wget.x86_64 0:1.11.4-2.el5_4.1 set to be updated
---> Package openssh-clients.x86_64 0:4.3p2-41.el5_5.1 set to be updated
--> Processing Dependency: libfipscheck.so.1()(64bit) for package: openssh-clients
---> Package newt.x86_64 0:0.52.2-15.el5 set to be updated
---> Package rpm.x86_64 0:4.4.2.3-20.el5_5.1 set to be updated
--> Processing Dependency: crontabs for package: rpm
--> Processing Dependency: logrotate for package: rpm
---> Package bzip2-libs.x86_64 0:1.0.3-6.el5_5 set to be updated
---> Package libxml2.x86_64 0:2.6.26-2.1.2.8.el5_5.1 set to be updated
---> Package gzip.x86_64 0:1.3.5-11.el5.centos.1 set to be updated
---> Package openssh.x86_64 0:4.3p2-41.el5_5.1 set to be updated
---> Package openldap.x86_64 0:2.3.43-12.el5_5.3 set to be updated
---> Package m2crypto.x86_64 0:0.16-6.el5.6 set to be updated
---> Package findutils.x86_64 1:4.2.27-6.el5 set to be updated
---> Package psmisc.x86_64 0:22.2-7 set to be updated
---> Package audit-libs.x86_64 0:1.7.17-3.el5 set to be updated
---> Package procps.x86_64 0:3.2.7-16.el5 set to be updated
---> Package db4.x86_64 0:4.3.29-10.el5_5.2 set to be updated
---> Package krb5-libs.x86_64 0:1.6.1-36.el5_5.6 set to be updated
---> Package initscripts.x86_64 0:8.45.30-3.el5.centos set to be updated
---> Package libacl.x86_64 0:2.2.39-6.el5 set to be updated
---> Package pam.x86_64 0:0.99.6.2-6.el5_5.2 set to be updated
---> Package e2fsprogs.x86_64 0:1.39-23.el5_5.1 set to be updated
---> Package bash.x86_64 0:3.2-24.el5 set to be updated
---> Package iputils.x86_64 0:20020927-46.el5 set to be updated
---> Package tzdata.x86_64 0:2010l-1.el5 set to be updated
---> Package coreutils.x86_64 0:5.97-23.el5_4.2 set to be updated
---> Package authconfig.x86_64 0:5.3.21-6.el5 set to be updated
---> Package nss.x86_64 0:3.12.8-1.el5.centos set to be updated
---> Package sysklogd.x86_64 0:1.4.1-46.el5 set to be updated
---> Package shadow-utils.x86_64 2:4.0.17-15.el5 set to be updated
---> Package mcstrans.x86_64 0:0.2.11-3.el5 set to be updated
---> Package expat.x86_64 0:1.95.8-8.3.el5_5.3 set to be updated
---> Package device-mapper.x86_64 0:1.02.39-1.el5_5.2 set to be updated
---> Package yum-metadata-parser.x86_64 0:1.1.2-3.el5.centos set to be updated
---> Package python.x86_64 0:2.4.3-27.el5_5.3 set to be updated
---> Package nspr.x86_64 0:4.8.6-1.el5_5 set to be updated
---> Package yum.noarch 0:3.2.22-26.el5.centos set to be updated
---> Package popt.x86_64 0:1.10.2.3-20.el5_5.1 set to be updated
---> Package python-urlgrabber.noarch 0:3.1.0-5.el5 set to be updated
---> Package tzdata.noarch 0:2010e-1.el5 set to be updated
---> Package grep.x86_64 0:2.5.1-55.el5 set to be updated
---> Package centos-release-notes.x86_64 0:5.5-0 set to be updated
---> Package dhclient.x86_64 12:3.0.5-23.el5_5.2 set to be updated
---> Package e2fsprogs-libs.x86_64 0:1.39-23.el5_5.1 set to be updated
---> Package openssl.x86_64 0:0.9.8e-12.el5_4.6 set to be updated
---> Package bzip2.x86_64 0:1.0.3-6.el5_5 set to be updated
---> Package libsepol.x86_64 0:1.15.2-3.el5 set to be updated
---> Package elfutils-libelf.x86_64 0:0.137-3.el5 set to be updated
---> Package cyrus-sasl-lib.x86_64 0:2.1.22-5.el5_4.3 set to be updated
---> Package filesystem.x86_64 0:2.4.0-3.el5 set to be updated
---> Package usermode.x86_64 0:1.88-3.el5.2 set to be updated
---> Package sqlite.x86_64 0:3.3.6-5 set to be updated
---> Package SysVinit.x86_64 0:2.86-15.el5 set to be updated
---> Package libselinux.x86_64 0:1.33.4-5.5.el5 set to be updated
---> Package udev.x86_64 0:095-14.21.el5_5.1 set to be updated
---> Package yum-fastestmirror.noarch 0:1.1.16-14.el5.centos.1 set to be updated
---> Package readline.x86_64 0:5.1-3.el5 set to be updated
---> Package chkconfig.x86_64 0:1.3.30.2-2.el5 set to be updated
---> Package ethtool.x86_64 0:6-4.el5 set to be updated
---> Package libstdc++.x86_64 0:4.1.2-48.el5 set to be updated
---> Package setup.noarch 0:2.5.58-7.el5 set to be updated
---> Package libuser.x86_64 0:0.54.7-2.1.el5_4.1 set to be updated
---> Package libgcc.x86_64 0:4.1.2-48.el5 set to be updated
---> Package tcp_wrappers.x86_64 0:7.6-40.7.el5 set to be updated
---> Package less.x86_64 0:436-2.el5 set to be updated
---> Package module-init-tools.x86_64 0:3.3-0.pre3.1.60.el5_5.1 set to be updated
--> Processing Dependency: binutils for package: module-init-tools
--> Processing Dependency: mkinitrd for package: module-init-tools
---> Package util-linux.x86_64 0:2.13-0.52.el5_4.1 set to be updated
---> Package glib2.x86_64 0:2.12.3-4.el5_3.1 set to be updated
---> Package rpm-libs.x86_64 0:4.4.2.3-20.el5_5.1 set to be updated
---> Package iproute.x86_64 0:2.6.18-11.el5 set to be updated
---> Package openssh-server.x86_64 0:4.3p2-41.el5_5.1 set to be updated
--> Running transaction check
---> Package crontabs.noarch 0:1.10-8 set to be updated
---> Package binutils.x86_64 0:2.17.50.0.6-14.el5 set to be updated
---> Package mkinitrd.x86_64 0:5.1.19.6-61.el5_5.2 set to be updated
--> Processing Dependency: kpartx >= 0.4.7-9 for package: mkinitrd
--> Processing Dependency: cpio for package: mkinitrd
--> Processing Dependency: nash = 5.1.19.6-61.el5_5.2 for package: mkinitrd
--> Processing Dependency: hmaccalc for package: mkinitrd
--> Processing Dependency: lvm2 for package: mkinitrd
--> Processing Dependency: dmraid for package: mkinitrd
--> Processing Dependency: tar for package: mkinitrd
--> Processing Dependency: device-mapper-multipath >= 0.4.7-9 for package: mkinitrd
---> Package fipscheck-lib.x86_64 0:1.2.0-1.el5 set to be updated
--> Processing Dependency: /usr/bin/fipscheck for package: fipscheck-lib
---> Package logrotate.x86_64 0:3.7.4-9.el5_5.2 set to be updated
--> Running transaction check
---> Package nash.x86_64 0:5.1.19.6-61.el5_5.2 set to be updated
---> Package hmaccalc.x86_64 0:0.9.6-3.el5 set to be updated
---> Package kpartx.x86_64 0:0.4.7-34.el5_5.6 set to be updated
---> Package fipscheck.x86_64 0:1.2.0-1.el5 set to be updated
---> Package device-mapper-multipath.x86_64 0:0.4.7-34.el5_5.6 set to be updated
--> Processing Dependency: libsysfs.so.2()(64bit) for package: device-mapper-multipath
---> Package tar.x86_64 2:1.15.1-30.el5 set to be updated
---> Package lvm2.x86_64 0:2.02.56-8.el5_5.6 set to be updated
--> Processing Dependency: device-mapper-event for package: lvm2
---> Package cpio.x86_64 0:2.6-23.el5_4.1 set to be updated
---> Package dmraid.x86_64 0:1.0.0.rc13-63.el5 set to be updated
--> Processing Dependency: dmraid-events for package: dmraid
--> Running transaction check
---> Package libsysfs.x86_64 0:2.0.0-6 set to be updated
---> Package dmraid-events.x86_64 0:1.0.0.rc13-63.el5 set to be updated
--> Processing Dependency: sgpio for package: dmraid-events
---> Package device-mapper-event.x86_64 0:1.02.39-1.el5_5.2 set to be updated
--> Running transaction check
---> Package sgpio.x86_64 0:1.2.0_10-2.el5 set to be updated
filelists.sqlite.bz2 100% |=========================| 4.0 MB 00:00
filelists.sqlite.bz2 100% |=========================| 3.6 MB 00:00
filelists.sqlite.bz2 100% |=========================| 228 kB 00:00
filelists.xml.gz 100% |=========================| 197 B 00:00
--> Finished Dependency Resolution
Dependencies Resolved
=============================================================================
Package Arch Version Repository Size
=============================================================================
Updating:
SysVinit x86_64 2.86-15.el5 base 117 k
audit-libs x86_64 1.7.17-3.el5 base 78 k
authconfig x86_64 5.3.21-6.el5 base 454 k
bash x86_64 3.2-24.el5 base 1.9 M
bzip2 x86_64 1.0.3-6.el5_5 updates 50 k
bzip2-libs x86_64 1.0.3-6.el5_5 updates 35 k
centos-release-notes x86_64 5.5-0 base 39 k
chkconfig x86_64 1.3.30.2-2.el5 base 159 k
coreutils x86_64 5.97-23.el5_4.2 base 3.5 M
cyrus-sasl-lib x86_64 2.1.22-5.el5_4.3 base 130 k
db4 x86_64 4.3.29-10.el5_5.2 updates 899 k
device-mapper x86_64 1.02.39-1.el5_5.2 updates 758 k
dhclient x86_64 12:3.0.5-23.el5_5.2 updates 282 k
e2fsprogs x86_64 1.39-23.el5_5.1 updates 995 k
e2fsprogs-libs x86_64 1.39-23.el5_5.1 updates 118 k
elfutils-libelf x86_64 0.137-3.el5 base 53 k
ethtool x86_64 6-4.el5 base 64 k
expat x86_64 1.95.8-8.3.el5_5.3 updates 76 k
filesystem x86_64 2.4.0-3.el5 base 1.0 M
findutils x86_64 1:4.2.27-6.el5 base 294 k
glib2 x86_64 2.12.3-4.el5_3.1 base 693 k
grep x86_64 2.5.1-55.el5 base 176 k
gzip x86_64 1.3.5-11.el5.centos.1 base 104 k
initscripts x86_64 8.45.30-3.el5.centos updates 1.6 M
iproute x86_64 2.6.18-11.el5 base 822 k
iputils x86_64 20020927-46.el5 base 131 k
krb5-libs x86_64 1.6.1-36.el5_5.6 updates 675 k
less x86_64 436-2.el5 base 107 k
libacl x86_64 2.2.39-6.el5 base 19 k
libgcc x86_64 4.1.2-48.el5 base 98 k
libselinux x86_64 1.33.4-5.5.el5 base 77 k
libsepol x86_64 1.15.2-3.el5 base 131 k
libstdc++ x86_64 4.1.2-48.el5 base 352 k
libuser x86_64 0.54.7-2.1.el5_4.1 base 450 k
libxml2 x86_64 2.6.26-2.1.2.8.el5_5.1 updates 807 k
m2crypto x86_64 0.16-6.el5.6 base 494 k
mcstrans x86_64 0.2.11-3.el5 base 17 k
module-init-tools x86_64 3.3-0.pre3.1.60.el5_5.1 updates 443 k
newt x86_64 0.52.2-15.el5 base 113 k
nspr x86_64 4.8.6-1.el5_5 updates 119 k
nss x86_64 3.12.8-1.el5.centos updates 1.1 M
openldap x86_64 2.3.43-12.el5_5.3 updates 303 k
openssh x86_64 4.3p2-41.el5_5.1 updates 287 k
openssh-clients x86_64 4.3p2-41.el5_5.1 updates 450 k
openssh-server x86_64 4.3p2-41.el5_5.1 updates 274 k
openssl x86_64 0.9.8e-12.el5_4.6 base 1.4 M
pam x86_64 0.99.6.2-6.el5_5.2 updates 978 k
popt x86_64 1.10.2.3-20.el5_5.1 updates 77 k
procps x86_64 3.2.7-16.el5 base 214 k
psmisc x86_64 22.2-7 base 62 k
python x86_64 2.4.3-27.el5_5.3 updates 6.0 M
python-urlgrabber noarch 3.1.0-5.el5 base 131 k
readline x86_64 5.1-3.el5 base 228 k
rpm x86_64 4.4.2.3-20.el5_5.1 updates 1.2 M
rpm-libs x86_64 4.4.2.3-20.el5_5.1 updates 923 k
rpm-python x86_64 4.4.2.3-20.el5_5.1 updates 63 k
setup noarch 2.5.58-7.el5 base 125 k
shadow-utils x86_64 2:4.0.17-15.el5 base 1.1 M
sqlite x86_64 3.3.6-5 base 206 k
sysklogd x86_64 1.4.1-46.el5 base 76 k
tcp_wrappers x86_64 7.6-40.7.el5 base 112 k
tzdata x86_64 2010l-1.el5 updates 796 k
tzdata noarch 2010e-1.el5 base 794 k
udev x86_64 095-14.21.el5_5.1 updates 2.4 M
usermode x86_64 1.88-3.el5.2 base 155 k
util-linux x86_64 2.13-0.52.el5_4.1 base 1.8 M
wget x86_64 1.11.4-2.el5_4.1 base 582 k
yum noarch 3.2.22-26.el5.centos base 1.0 M
yum-fastestmirror noarch 1.1.16-14.el5.centos.1 base 19 k
yum-metadata-parser x86_64 1.1.2-3.el5.centos base 25 k
Installing for dependencies:
binutils x86_64 2.17.50.0.6-14.el5 base 2.9 M
cpio x86_64 2.6-23.el5_4.1 base 122 k
crontabs noarch 1.10-8 base 5.0 k
device-mapper-event x86_64 1.02.39-1.el5_5.2 updates 21 k
device-mapper-multipath x86_64 0.4.7-34.el5_5.6 updates 3.0 M
dmraid x86_64 1.0.0.rc13-63.el5 base 741 k
dmraid-events x86_64 1.0.0.rc13-63.el5 base 24 k
fipscheck x86_64 1.2.0-1.el5 base 13 k
fipscheck-lib x86_64 1.2.0-1.el5 base 6.7 k
hmaccalc x86_64 0.9.6-3.el5 base 21 k
kpartx x86_64 0.4.7-34.el5_5.6 updates 434 k
libsysfs x86_64 2.0.0-6 base 45 k
logrotate x86_64 3.7.4-9.el5_5.2 updates 41 k
lvm2 x86_64 2.02.56-8.el5_5.6 updates 2.7 M
mkinitrd x86_64 5.1.19.6-61.el5_5.2 updates 454 k
nash x86_64 5.1.19.6-61.el5_5.2 updates 1.1 M
sgpio x86_64 1.2.0_10-2.el5 base 11 k
tar x86_64 2:1.15.1-30.el5 base 747 k
Transaction Summary
=============================================================================
Install 18 Package(s)
Update 70 Package(s)
Remove 0 Package(s)
Total download size: 53 M
Is this ok [y/N]: y
Downloading Packages:
(1/88): openssh-server-4. 100% |=========================| 274 kB 00:00
(2/88): iproute-2.6.18-11 100% |=========================| 822 kB 00:00
(3/88): rpm-libs-4.4.2.3- 100% |=========================| 923 kB 00:00
(4/88): logrotate-3.7.4-9 100% |=========================| 41 kB 00:00
(5/88): glib2-2.12.3-4.el 100% |=========================| 693 kB 00:00
(6/88): util-linux-2.13-0 100% |=========================| 1.8 MB 00:00
(7/88): module-init-tools 100% |=========================| 443 kB 00:00
(8/88): less-436-2.el5.x8 100% |=========================| 107 kB 00:00
(9/88): tcp_wrappers-7.6- 100% |=========================| 112 kB 00:00
(10/88): libgcc-4.1.2-48. 100% |=========================| 98 kB 00:00
(11/88): libuser-0.54.7-2 100% |=========================| 450 kB 00:00
(12/88): setup-2.5.58-7.e 100% |=========================| 125 kB 00:00
(13/88): libstdc++-4.1.2- 100% |=========================| 352 kB 00:00
(14/88): ethtool-6-4.el5. 100% |=========================| 64 kB 00:00
(15/88): chkconfig-1.3.30 100% |=========================| 159 kB 00:00
(16/88): dmraid-1.0.0.rc1 100% |=========================| 741 kB 00:00
(17/88): readline-5.1-3.e 100% |=========================| 228 kB 00:00
(18/88): yum-fastestmirro 100% |=========================| 19 kB 00:00
(19/88): fipscheck-lib-1. 100% |=========================| 6.7 kB 00:00
(20/88): udev-095-14.21.e 100% |=========================| 2.4 MB 00:00
(21/88): libselinux-1.33. 100% |=========================| 77 kB 00:00
(22/88): SysVinit-2.86-15 100% |=========================| 117 kB 00:00
(23/88): sqlite-3.3.6-5.x 100% |=========================| 206 kB 00:00
(24/88): cpio-2.6-23.el5_ 100% |=========================| 122 kB 00:00
(25/88): usermode-1.88-3. 100% |=========================| 155 kB 00:00
(26/88): filesystem-2.4.0 100% |=========================| 1.0 MB 00:00
(27/88): cyrus-sasl-lib-2 100% |=========================| 130 kB 00:00
(28/88): elfutils-libelf- 100% |=========================| 53 kB 00:00
(29/88): libsepol-1.15.2- 100% |=========================| 131 kB 00:00
(30/88): device-mapper-ev 100% |=========================| 21 kB 00:00
(31/88): lvm2-2.02.56-8.e 100% |=========================| 2.7 MB 00:00
(32/88): bzip2-1.0.3-6.el 100% |=========================| 50 kB 00:00
(33/88): openssl-0.9.8e-1 100% |=========================| 1.4 MB 00:00
(34/88): e2fsprogs-libs-1 100% |=========================| 118 kB 00:00
(35/88): dmraid-events-1. 100% |=========================| 24 kB 00:00
(36/88): tar-1.15.1-30.el 100% |=========================| 747 kB 00:00
(37/88): dhclient-3.0.5-2 100% |=========================| 282 kB 00:00
(38/88): mkinitrd-5.1.19. 100% |=========================| 454 kB 00:00
(39/88): centos-release-n 100% |=========================| 39 kB 00:00
(40/88): grep-2.5.1-55.el 100% |=========================| 176 kB 00:00
(41/88): tzdata-2010e-1.e 100% |=========================| 794 kB 00:00
(42/88): binutils-2.17.50 100% |=========================| 2.9 MB 00:00
(43/88): device-mapper-mu 100% |=========================| 3.0 MB 00:00
(44/88): python-urlgrabbe 100% |=========================| 131 kB 00:00
(45/88): fipscheck-1.2.0- 100% |=========================| 13 kB 00:00
(46/88): popt-1.10.2.3-20 100% |=========================| 77 kB 00:00
(47/88): yum-3.2.22-26.el 100% |=========================| 1.0 MB 00:00
(48/88): nspr-4.8.6-1.el5 100% |=========================| 119 kB 00:00
(49/88): python-2.4.3-27. 100% |=========================| 6.0 MB 00:00
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Running rpm_check_debug
Running Transaction Test
Finished Transaction Test
Transaction Test Succeeded
Running Transaction
Updating : bash ##################### [ 1/157]
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